rs243386845 SNP Detail

Summary

• ID
  rs243386845
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:37298806 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GCTGAGGGA GATAGAGGCC ATGATCGCAG
  TCCAAGAGGA AAAGATCTTC AGACTCAGAA GAATCATAAA ATGATGAGGA GTCTCTAAGC
  CAAGATGCTA CACAAGGCAC TCCATAGACA CACGCACAAG CACTATAgca tccatagatc
  C
  tgcacctgga gagccaatca accagatatt tggaaaaaac gttctgagct gaacatttag
  aggttttatt tctcctggtc atttatccct acacaacaca atacggcttc ggagcattta
  tgctacatgt attgggcact ataagaaacc                                 
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319691078	CHEV_1_37316570	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243386845					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:37298806 () rs orientation: forward

Symbol	Name	Function Class
Cnga3	cyclic nucleotide gated channel alpha 3	within coordinates
Cpgi160	CpG island 160	1553 bp proximal
Gm69908	predicted gene, 69908	632 bp downstream
Rr409496	regulatory region 409496	1071 bp distal