rs243390365 SNP Detail

Summary

• ID
  rs243390365
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr1:128676989 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCT CCTCTCTCCC TTTCCCTCCC
  C
  CCTTCTCCCT TTCCTCCCTT CCTTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss319966904	CHEV_1_130645829	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243390365					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:128676989 () rs orientation: forward

Symbol	Name	Function Class
Gm29599	predicted gene 29599	1674 bp upstream
Gm70593	predicted gene, 70593	within coordinates
Gm70801	predicted gene, 70801	1706 bp upstream
Tssr8546	transcription start site region 8546	1552 bp downstream
Tssr13487	transcription start site region 13487	1701 bp upstream