rs243398131 SNP Detail

Summary

• ID
  rs243398131
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:63401608 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTT TCCAGCACGA ATGCTGTGGT
  R
  GGCACAGTAA CTGCTCTAAA CTTTT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324654224	CHEV_14_63782996	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243398131					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:63401608 () rs orientation: forward

Symbol	Name	Function Class
Cpgi6599	CpG island 6599	358 bp proximal
Fdft1	farnesyl diphosphate farnesyl transferase 1	within coordinates
Gm53861	predicted gene, 53861	1848 bp upstream
Rr297363	regulatory region 297363	within coordinates
Tssr129158	transcription start site region 129158	509 bp downstream
Tssr129159	transcription start site region 129159	766 bp downstream
Tssr129160	transcription start site region 129160	788 bp downstream
Tssr129161	transcription start site region 129161	808 bp downstream