rs243402724 SNP Detail

Summary

• ID
  rs243402724
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:3730010 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTGCTCAGC TTTTCTCCTC
  CCCCAATAAC CCAGGACCAC CCACAGGGAG CTGAGCCTTC AACCATGAAT CAAGAAAATG
  TCCTGCCAGG CAGTGGTGGC ATATGCCTTT AATCCCAGCA CTTGGGAGGC AGAGGCAGGC
  GGAATTCTGA GTTCAAGGCC AGCCTGGTCT ACAGAGTGAG TTCCCTAACA GCCAGGGCTA
  Y
  ACAGAAAAAC CCTGCCATGA AAAACCAAAA AAAAAAAAAA AAAAAAAAAA AGAAAGAAAG
  AAAGAAAGAA AGAAAGAAAA AGAAAAAAGA AACTGGCCCA CAGCAGGCTG GCCCACAGCC
  TGATCTCATG TTCTTAGTTG AGGTTCTCTC CTCTTAGATG ATGTTAGCTT GTGTGACATA
  AATCTCTCCA GCATAAAAGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320205106	CHEV_2_3646245	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243402724					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3730010 () rs orientation: forward

Symbol	Name	Function Class
Fam107b	family with sequence similarity 107, member B	within coordinates
Rr367092	regulatory region 367092	1168 bp downstream
Rr396754	regulatory region 396754	1850 bp downstream
Tssr15911	transcription start site region 15911	1788 bp downstream
Tssr15912	transcription start site region 15912	1984 bp upstream