rs243409350 SNP Detail

Summary

• ID
  rs243409350
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:79973425 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGTTG GCATAGTTTA CTCCTGTGCC
  C
  GTCTTTGCCC TGGCAGTTCA GATTT                                      
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325030236	CHEV_15_79919654	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243409350					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:79973425 () rs orientation: forward

Symbol	Name	Function Class
Cpgi7362	CpG island 7362	1545 bp proximal
Gm24204	predicted gene, 24204	671 bp upstream
Gm31134	predicted gene, 31134	1509 bp downstream
Rr304341	regulatory region 304341	225 bp distal
Rr312104	regulatory region 312104	1375 bp proximal
Tssr132156	transcription start site region 132156	1974 bp upstream
Tssr135417	transcription start site region 135417	321 bp upstream