rs243469442 SNP Detail

Summary

• ID
  rs243469442
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:31342627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTTTTGTTTC TTCTTTGACC ATGGCTACTA ACAAACCACA
  ACCAAGCCCC TTAACTGACC AACCACCACC CACTCTCTTC TTCCCCTCTC TCAAAGCCCT
  M
  GAATTTCCAT ACCCTCTGAA AATTTCCCAA AATTTCAAAC ATCACACAAT CACAGGAATT
  ATCTGCAGCT GGCAAAACTG TGCCTCTGCT AGAGCATGA                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325358771	CHEV_17_31260598	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243469442					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:31342627 () rs orientation: forward

Symbol	Name	Function Class
Rr330604	regulatory region 330604	1027 bp distal
Rr334775	regulatory region 334775	1574 bp proximal
Rr341219	regulatory region 341219	1227 bp distal
Tff3	trefoil factor 3, intestinal	1653 bp downstream