rs243478053 SNP Detail

Summary

• ID
  rs243478053
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131709020 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    tgtaaacct agtacctggg aggcggatga
  tagcaagtta taggtaggac agggctacat agtaaggctc tgtctgaaaa cataaacaaa
  CAAACAAACA AATTCAACTC TCTTTTTtct ctctttgtag cctaggcttg ccttaaacaa
  Y
  ccgctcgcct ccagagaact ggtattacag gtgtaatctg ccacacccag ctCCCTCACT
  GTTCTTCTCC CATAGTCCTT TGCTTCTTCC CTTTCTTTCT CCTCTCTTTT TTTCCCTTTG
  CCCCCATGGA GGgagtcttg ctatgtagcc                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329606	CHEV_4_131537624	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243478053					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131709020 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600833	regulatory region 600833	236 bp proximal
Rr600834	regulatory region 600834	389 bp proximal
Rr600835	regulatory region 600835	1055 bp proximal
Tssr43622	transcription start site region 43622	1017 bp downstream