rs243480441 SNP Detail

Summary

• ID
  rs243480441
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:75597769 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TCCTT TTTGTGGCTT GGGATATGAG
  Y
  ACTCAGCTGC TCCCCACTAT GGTGG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324102535	CHEV_12_76651982	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243480441					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:75597769 () rs orientation: forward

Symbol	Name	Function Class
Gm59526	predicted gene, 59526	within coordinates
Ppp2r5e	protein phosphatase 2, regulatory subunit B', epsilon	within coordinates
Rr467982	regulatory region 467982	1333 bp proximal
Tssr116681	transcription start site region 116681	1355 bp upstream
Tssr116682	transcription start site region 116682	1334 bp upstream
Tssr116683	transcription start site region 116683	1300 bp upstream