rs243578750 SNP Detail

Summary

• ID
  rs243578750
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:92898462 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CCAATAATCT AAATTAGCTG TGAGAGAGAC TAGTAGCAAG
  CAGGTCTACT TTATTCTCTC CATCTGTCTT ATACACTAGA CAGAAATAGG AAGAAAAGAA
  R
  GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAGGAAG GAAGGAAGGA AGGAAAAAGG
  AAGGCAGGCA GGAGCTAACA GAACAGAGAA GAGGGAGGG                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325064823	CHEV_15_92831012	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243578750					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:92898462 () rs orientation: forward

Symbol	Name	Function Class
Gm30085	predicted gene, 30085	937 bp upstream
Gm62083	predicted gene, 62083	551 bp downstream
Rr391110	regulatory region 391110	478 bp upstream
Rr508114	regulatory region 508114	935 bp proximal
Rr508115	regulatory region 508115	1318 bp proximal
Rr508116	regulatory region 508116	1469 bp proximal
Rr508117	regulatory region 508117	1608 bp proximal
Rr508118	regulatory region 508118	1831 bp proximal
Tssr132761	transcription start site region 132761	1623 bp upstream