rs243585542 SNP Detail

Summary

• ID
  rs243585542
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:131711381 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGAGGGCTT TGTTTTTGTT TTGTGAATGC
  ATAACACGTG ACtatcaaga tcaaatgaga ttaaggttgt aaaactgctt tgtaaactat
  aaaTGTTTAT TAGTACTAGA ATTTTAGTTT CTAATAGTTC AGCGGTCCAT CTACATACAG
  R
  TCATAAAATA AAATTACAAA AAAAATACGG agctaggcat agtggcatat acctgcgatt
  ccagcttgtg ggagacggga gtgggaggat aaggtgttag ccttaggttt catgagaagc
  tgtctcaaCC CCTACCCTCA TCCCCAGACT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321329629	CHEV_4_131539985	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243585542					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:131711381 () rs orientation: forward

Symbol	Name	Function Class
Epb41	erythrocyte membrane protein band 4.1	within coordinates
Rr600834	regulatory region 600834	1951 bp distal
Rr600835	regulatory region 600835	502 bp distal
Tssr43622	transcription start site region 43622	1340 bp upstream