rs243601594 SNP Detail

Summary

• ID
  rs243601594
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:100183055 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AATAAATAAA AAGCCTCCAC
  CTAATTAGTT TCCCAAATGA TTCTTAAGAG CATCTTAAGC GCGCGCGCAC ACACACACAC
  ACACACAAAC ACATACACAT CCAGGCTCCT GCTATAGAAA CCAGTTGTGA TTTTAAGTAC
  AACCATTTCC CCTTCTAATT AGGCTAAAAG TCTACATAAG TCTGATTCAG AACTGTCTCC
  A
  CCAATCAATG GGTTAAAGCC AGATGGTGGC ATTGCTCTGT GAGCCTAGCA TCTCATCTGT
  AAAGCTATAA ACAATGCTGG CTTCTTAGGA CTGGGTGAGC ATGACTGGAG GTCGCTCATG
  AAATACTCCC TGGGTGTTAA ATACTTCAGA AACCTTTCTC CTTTGTTCCT CAAACCTTGA
  CCAGGACCCG GCAATCATTC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323141713	CHEV_9_100201421	CHEVERUD	SCREENING_POP	f	SNP	A	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243601594					SNP	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:100183055 () rs orientation: forward

Symbol	Name	Function Class
Gm28167	predicted gene 28167	within coordinates
Rr685479	regulatory region 685479	615 bp proximal
Rr685480	regulatory region 685480	741 bp proximal