rs243614351 SNP Detail

Summary

• ID
  rs243614351
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:170415931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    AAACTAAAG GAAATTGACA CCTGACGGCA
  GTCCTTGCAC AACAGGCTAA CCTGCGGGTC ACTGCAGAAA AGAGAACGGA GCAAGTCTGC
  CTTTTGTCAA AAGTCTTGTT CTCAAAACCC AATCTATACA GAGCTCGCTT AAATTCCACT
  M
  AGTAACAAGC ACACTGTGCA TGCTGAGCAT CCCTGCGCGT TTCTTTCCTT AAGTTATAGG
  TAGGACTGGG CATCAGTCAC GAGCAGAAGC CTTTTCCACT GAAAAGCACC ATTCCGGGAA
  ACTCCACTGC AGTCTTAGAA GCCAGAACTC                                 
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320111475	CHEV_1_172518493	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243614351					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:170415931 () rs orientation: forward

Symbol	Name	Function Class
Cpgi994	CpG island 994	649 bp proximal
Nos1ap	nitric oxide synthase 1 (neuronal) adaptor protein	Intron
Rr423086	regulatory region 423086	within coordinates
Rr423087	regulatory region 423087	1489 bp proximal
Tssr14920	transcription start site region 14920	1389 bp downstream
Tssr14921	transcription start site region 14921	1429 bp downstream