rs243691876 SNP Detail

Summary

• ID
  rs243691876
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:48712743 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGCTATTCT GTTCCCGAGC
  ACCGTACGGC GATCGTACAT CTCATCTCTC TCTGGTATAT TCTTCAGACA CTCCTTTTGA
  AGCACCGGAA GATAAACGTG CATTCTTTTC CACCATCACC CCTCTGTTCT AGAAAGGACA
  GCACACTGTA GATACGTCTT TACATCTTTC CTCTCAGGAA CATACAAGAC AGGAACCCTG
  K
  TTTGTGTTTT GAGGCAGAGT CTAAGTAGTT CAGGCTGCCC TCAAACGTGC CATGTTTTTG
  AACTCCAGAC CGCCTGCCTC TATGTTCTGA GAACCAGGGT TACAGGTGTG CACCACCATG
  CCCAGCTACA AATGCCTTTT TTATTAAAAA CAAAAACAAA AACAAAACAC AAACCAAATT
  ATCTTCCGAC ACCAACAACG                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323664651	CHEV_11_48635418	CHEVERUD	SCREENING_POP	f	SNP	T	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243691876					SNP	T	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:48712743 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2780	CpG island 2780	164 bp distal
Gm74096	predicted gene, 74096	within coordinates
n-TGacc1	nuclear encoded tRNA glycine 1 (anticodon ACC)	1812 bp upstream
Rr446121	regulatory region 446121	1748 bp distal
Rr446122	regulatory region 446122	1452 bp proximal