rs243778724 SNP Detail

Summary

• ID
  rs243778724
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:61181610 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATCAAAAAC TCTTCTCAAT
  GACAAAATCC AGGGATTCCC ACTAAAACTA GAAGTGCCGG CTCCAGGGTA ACATCGCTTT
  TCCCATTTCT CCATTCTGTT TTCCCCATCA TGGAACACAG CTCTGGAGGA CTTGGTGTTT
  CTTTTTGTTT GTTTGTTTTT GTTTTTGTTT TAAGTGTTAA ACAAAGTAAA GGTTGTAAGG
  R
  CTTTGAGTCT TCGCATGCGC CACACGCAAA CACAGTCAGC ATCATCTTCT CCCCAGAGCT
  CAAGACAGGA GCCGTGAGCC AGCCCAGCCC TCCCCCTGAA AGCTGTGGAA TGGACCCTGC
  CTGCCCTTCC CACGGGAACT CCAGCAGATT CCTCTGCAGG AAGAGCTCCT GTGTGAATCC
  TGAGAGCCTG TCTTCCCCAG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323328393	CHEV_10_60808579	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243778724					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:61181610 () rs orientation: forward

Symbol	Name	Function Class
Pald1	phosphatase domain containing, paladin 1	within coordinates
Rr215533	regulatory region 215533	1210 bp distal
Rr215534	regulatory region 215534	1191 bp proximal
Rr228161	regulatory region 228161	1410 bp distal
Rr228162	regulatory region 228162	within coordinates