rs243799815 SNP Detail

Summary

• ID
  rs243799815
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:33873758 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TCAAGTTAAC TGTTCTGTTT GATTTGCTCG AAATTTTGTT
  GCCAAGATCT TCAGGAGGTC TACCCCTGTT ATATTTGATC CATATCACAT GGGAAGGGAT
  Y
  CAAAGCCTTT TCTCCTTTCC TGTCAACATA ATTACAGAGC CTTTCTCTCA AAATAGCATG
  TCCTTAGTCC AGTAACCAGA AATCATTAAA GGTTTAGCT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322148788	CHEV_7_34959352	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243799815					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:33873758 () rs orientation: forward

Symbol	Name	Function Class
Gm12778	predicted gene 12778	1379 bp upstream
Rr156123	regulatory region 156123	1758 bp distal
Rr170511	regulatory region 170511	1758 bp distal
Rr170512	regulatory region 170512	758 bp distal
Rr380644	regulatory region 380644	1354 bp upstream