rs243810074 SNP Detail

Summary

• ID
  rs243810074
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr10:117429260 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGCCAGGAG TTGCATAGCA
  CGAGATGTTC CTGAATCTTG TTGCTACTAT CACCTAGACA TAAGGACACC TTCTGAACTT
  CATCAAGCTC CATGAATTCC AAGAAGAATG AACAAGAATT AACATGAATT GACAAGAAGT
  CTGGGGGTGG AGAAGCAGAG ACAGCTTAGC AGTTAAGAGC GTGTAGCTCT CTTGCAGAGG
  W
  CCTATACTCA ATTCCCAGCA CCCATGTCCA GTAAGTCACA AAGGCCTGTA AGTCTAGATC
  CAGAGGGTCT GAAGCCCTCT TTTGTACTCT GCATGTATCT GCGCATGCAT GGGGCACACA
  CACACACACA CACACACACA CACACACGGT AGCACAGAAA CAAAAATAAA TCTAATAAAA
  AAATGAAAGA AAAAATTTTT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323497988	CHEV_10_117030411	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243810074					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr10:117429260 () rs orientation: forward

Symbol	Name	Function Class
Cpgi2233	CpG island 2233	702 bp proximal
Gm63651	predicted gene, 63651	1371 bp upstream
Kifc5c-ps	kinesin family member C5C, pseudogene	998 bp upstream