rs243813629 SNP Detail

Summary

• ID
  rs243813629
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:108505782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TAATGTTGAT TAAAAGAAAA
  TACAAAAATG TACACTGCTC TTCATAATTA AAGGAATAAG CAATAGAAGG CTCAATGTCT
  GACCAATACT GCCTATGATA ATTTAATAGA CTACATCAAC GTATAGATGA ATACGATTAT
  AATATTCGAC AAGCATTTCT TGGAGTGTTT TGCAACTGTC GTTGACTTCA ACGCTAGCAT
  Y
  CAACCAGACT GAGCAGCCTA CTGTTCTTCT GTCCAATTTG CAGGCAAGGG AAAGAAGAGA
  ACAGCAAGGT AGAAAATAAT TAAATATAAT TTCTACATCT TTCCCCTGAG ACAACGGGAG
  TAATAAGGTT TCAATTCCCT GTCCTAAAAT GTGACATGTA TTCATATCGT ATAATTCACT
  AAATCATATT ATGCGCAATT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320454328	CHEV_2_108515594	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243813629					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:108505782 () rs orientation: forward

Symbol	Name	Function Class
Rr373660	regulatory region 373660	1009 bp upstream