rs243834920 SNP Detail

Summary

• ID
  rs243834920
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:144940558 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        TGGCC TCCACACACT GGCACACACA
  Y
  ACATGCAAAC ATGGACACAC ACACA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321412969	CHEV_4_144803891	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243834920					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:144940558 () rs orientation: forward

Symbol	Name	Function Class
Rr87265	regulatory region 87265	243 bp proximal
Rr103536	regulatory region 103536	759 bp distal
Rr103537	regulatory region 103537	within coordinates
Tnfrsf1b	tumor necrosis factor receptor superfamily, member 1b	within coordinates
Tssr40194	transcription start site region 40194	18 bp downstream
Tssr40195	transcription start site region 40195	293 bp upstream
Tssr44484	transcription start site region 44484	1203 bp upstream
Tssr44485	transcription start site region 44485	1137 bp upstream
Tssr44486	transcription start site region 44486	315 bp upstream
Tssr44487	transcription start site region 44487	260 bp upstream
Tssr44488	transcription start site region 44488	143 bp upstream
Tssr44489	transcription start site region 44489	67 bp upstream
Tssr44490	transcription start site region 44490	210 bp downstream
Tssr44491	transcription start site region 44491	377 bp downstream
Tssr44492	transcription start site region 44492	602 bp downstream
Tssr44493	transcription start site region 44493	763 bp downstream
Tssr44494	transcription start site region 44494	997 bp downstream
Tssr44495	transcription start site region 44495	1058 bp downstream
Tssr44496	transcription start site region 44496	1127 bp downstream
Tssr44497	transcription start site region 44497	1250 bp downstream
Tssr44498	transcription start site region 44498	1375 bp downstream
Tssr44499	transcription start site region 44499	1418 bp downstream
Tssr44500	transcription start site region 44500	1506 bp downstream
Tssr44501	transcription start site region 44501	1566 bp downstream
Tssr44502	transcription start site region 44502	1662 bp downstream
Tssr44503	transcription start site region 44503	1778 bp downstream
Tssr44504	transcription start site region 44504	1844 bp downstream