rs243883067 SNP Detail

Summary

• ID
  rs243883067
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr15:100719120 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCACATCCC TTATCCATTC
  TGCCATAGAC GCTTGCTCGA GCCTTTAACG TTTCGATAAC TTTTTTGCAT TTGGTTATTC
  GCCTTTTCAA CAACTAAGGC CTCTATCAAC ACCTGCCTTC ATCTTGATCT GGTACGGCTT
  CCTTCACAGC TGAGACTAAT CTTTGTAATC AGTGAAGGCT TCTCAGAAGC CCTGTATAAT
  Y
  TTTATAAATG AGGTGGTCTT TTTCCTGGGC CCCTCAAATT TGTCCCAAGT TTTAAAGCCA
  CCAAGCAACA TTGTTCAGTA GTAATATTAT GTGATTGAAC CTGTTCTTGT ATATCAGAGC
  CCTGCCCTTC ACCCAGCAAT GGTGGAGCTG ATGGGATTCG GCTCAGAGAG CTGCCGCTGG
  AGCTGCTGCT TGTGGTGCTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325084571	CHEV_15_100651670	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243883067					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr15:100719120 () rs orientation: forward

Symbol	Name	Function Class
Rr301632	regulatory region 301632	681 bp proximal
Rr308909	regulatory region 308909	1142 bp proximal
Rr312513	regulatory region 312513	82 bp proximal
Slc4a8	solute carrier family 4 (anion exchanger), member 8	within coordinates
Tssr4723	transcription start site region 4723	1636 bp downstream