rs243931064 SNP Detail

Summary

• ID
  rs243931064
• Variation Type
  SNP
• Alleles
  A

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:3336098 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATTATTTAT TTATTTATTT
  TATTTTTATT TACATCAATT TATGTTTATG ATTATGTTTA ATCAGTTTAT GTTCAGGTTT
  TTTTTTTTAA CAAATATATG CTTCCCATAG TTCCCTAAAT TACTATGCAT TTGGTAGTCT
  ATATATACAC TAAATGGTCA ATTTACTTTT CAATGATAGC TTTTATTTTA CATTGTAAAT
  A
  AGTTATGTTT GTGAATAAAC AGTTTATAAA TGTACCATTT ATGATCATAG TTAATTTTAT
  AAATATCTCA AAATATTTTA ATAACTTAGA AGGTTTATGA AAGTATTCTT TTTGTCTTAA
  TTCTTGAACT GCTGGATTTA AAGGATACAA CAATATAACA TTAGCTTAAG AGTCTGAGTC
  AGAAATCGTA GCATTAGAGC                                            
  
  A = A
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	I/LnJ	JF1/MsJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss352905798	MGP_WTSI_2_3252333	EVA_MGPV3	EVA_MGPV3	f	SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	A/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeH	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CAST/EiJ	CBA/J	CE/J	CZECHII/EiJ	DBA/1J	FVB/NJ	I/LnJ	JF1/MsJ	LEWES/EiJ	LG/J	LP/J	MA/MyJ	MOLF/EiJ	NON/ShiLtJ	NZB/BlNJ	NZO/HlLtJ	NZW/LacJ	PL/J	PWK/PhJ	QSi3/Ianm	QSi5/Ianm	RIIIS/J	SJL/J	SM/J	ST/bJ	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs243931064					SNP	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss352905798	MGP_WTSI_2_3252333	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:3336098 () rs orientation: forward

Symbol	Name	Function Class
Acbd7	acyl-Coenzyme A binding domain containing 7	Intron
Rr550890	regulatory region 550890	1928 bp distal
Rr550891	regulatory region 550891	617 bp proximal
Rr550892	regulatory region 550892	1118 bp proximal
Tssr15888	transcription start site region 15888	1898 bp downstream
Tssr15889	transcription start site region 15889	1098 bp upstream
Tssr22358	transcription start site region 22358	921 bp downstream