rs243937153 SNP Detail

Summary

• ID
  rs243937153
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr8:124748345 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CGGAT GCGGACACCA GTCCTAACAG
  R
  AGGGAACCGG CTGGAGAGCC GGGAT                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322855963	CHEV_8_126545506	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243937153					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr8:124748345 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Mir1967	microRNA 1967			1035 bp upstream
Rr672602	regulatory region 672602			609 bp distal
Rr672603	regulatory region 672603			764 bp distal
Rr672604	regulatory region 672604			607 bp distal
Rr672605	regulatory region 672605			within coordinates
Taf5l	TATA-box binding protein associated factor 5 like			209 bp upstream
Tssr80012	transcription start site region 80012			405 bp downstream
Tssr80013	transcription start site region 80013			91 bp downstream
Tssr80014	transcription start site region 80014			76 bp downstream
Tssr80015	transcription start site region 80015			27 bp downstream
Tssr83422	transcription start site region 83422			651 bp upstream
Tssr83423	transcription start site region 83423			500 bp upstream
Tssr83424	transcription start site region 83424			161 bp upstream
Urb2	URB2 ribosome biogenesis 2 homolog (S. cerevisiae)			Intron
				mRNA-UTR