rs243966272 SNP Detail

Summary

• ID
  rs243966272
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:152552541 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    TGCTTTCAG CTCCATTTCT ACCTTCAAGC
  CCTGTAAGCA TCTTGCGACT ACAGACGTGT CCTATTCAGA GCAAGCATAA GTGAATGTTA
  AATGAATGTC AATTCATTAT TGACATTtgt tgcagacagc cctggggctg attatgtttg
  R
  tgttaattct gttctcctgt gaggggctgc gaacaaggaa tgagtcagca ctcgagtgat
  ttcctgtaaa ccttctttcc accttaattt ataaaataaa ggctagtgat tgggcagaga
  aagaggggaa ggtggagctt aaggttttgg                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320067362	CHEV_1_154523920	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243966272					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:152552541 () rs orientation: forward

Symbol	Name	Function Class
Rgl1	ral guanine nucleotide dissociation stimulator,-like 1	Intron
Rr420515	regulatory region 420515	1289 bp distal
Rr420516	regulatory region 420516	746 bp proximal
Rr420517	regulatory region 420517	1849 bp proximal