rs243971753 SNP Detail

Summary

• ID
  rs243971753
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:6481483 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ATGGC AGTGCAGAAC ACACACACAC
  Y
  CCGGCCTAGT TAACCCTTAA AAAGA                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320211080	CHEV_2_6397718	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243971753					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:6481483 () rs orientation: forward

Symbol	Name	Function Class
Cpgi11178	CpG island 11178	1710 bp proximal
Gm13391	predicted gene 13391	within coordinates
Gm52546	predicted gene, 52546	within coordinates
Rr551409	regulatory region 551409	1518 bp proximal
Rr551410	regulatory region 551410	1777 bp proximal