rs243992058 SNP Detail

Summary

• ID
  rs243992058
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:127855441 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    gcaaacgca GTTTCAGTCA TTGACTCTTG
  GCTTCGTGCA GGGTACAAGA TATAGGCTCC AAGGATCCAC TCACTTCTGT TAGATTTCAC
  Ttttttttat tattattata tgtaagtaag tacacttagc tgtcttcaga cactccagaa
  R
  agggggtcag atcttgttac agatggttgt gagccaccat gtggttgctg ggatttgaac
  tctggacctt cggaagaaca gtcgggtgct cttacccact gagccatctc accagcccGA
  TTTCACTTTA TCTTCAACAA CCTATCAAAT                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320501421	CHEV_2_127839257	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243992058					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:127855441 () rs orientation: forward

Symbol	Name	Function Class
Acoxl	acyl-Coenzyme A oxidase-like	within coordinates
Rr397292	regulatory region 397292	1099 bp upstream
Tssr20037	transcription start site region 20037	1662 bp upstream