rs243993731 SNP Detail

Summary

• ID
  rs243993731
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:107181778 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCATAGAAAA CCTGAGTGCT
  GGGATTACAG TGGTACACCA CTATAGCCCA CCAATACTGT ACCTAAGTGA GTCTATCAGA
  GTCTATGCAG GAGTCAAGGC AAAGGAAACA GCACCAAGAC AGCATGTAAT ATCTGGAGTT
  CTGGCCCGGT ACCTCCTTCC ACTCCTTAGT GGGATATGTG GACTTTCACA TTCTCTGTTG
  Y
  GCCTACCCGC AACTCTCCTT TCTCAGAGCT TGTTTGCAGG AAGGGGAGAA ACAAAAGAAA
  CTGAAGTTAA AGACTTCATA GTCTTTATAT AAATCTCGCT CCACAAAGGA TGCCATCTAA
  ACTCTCCTCT AGAAAGGAGA TCATGGGGGT GGGGGAAATA GGTTTAAAGG AAGGGCTAGA
  GGTATGTGAT AGAAATAGGA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320865156	CHEV_3_107077380	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs243993731					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:107181778 () rs orientation: forward

Symbol	Name	Function Class
Rr582951	regulatory region 582951	202 bp distal
Rr582952	regulatory region 582952	418 bp distal
Rr582953	regulatory region 582953	1744 bp proximal