rs244002602 SNP Detail

Summary

• ID
  rs244002602
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:25975213 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTGTTTA GTGATGTTCA
  CCACTAGTTT GGATTGTCTA GCTCCTATCC AGTTTGACCA CTGACTTTGT GACCAGGCAT
  AGCTCTCTGT CTACACATAG TGGCTGCTTA ATCAATGTGT TTAATGAGTG AACACATAGC
  TAACTCTTGA ATACCCCTTC TAAGCCGAGT TGCTCTAGGA GCCTAGGTAT TAACTTTTTA
  K
  AATGAAAGTT ATTTTATTCC ACAGGTATTC TAATGAGTAT GGGTTTCAAT CATGTGGCCA
  CTACTCCCAT TCTTGCTTGT CACAGCACTC ATATAACCTC ACTAAGCTCT TCCATTTGCT
  TGACCAGATG CCCCAGAACA GCCAATCTAA AAAAGGTGTC ACTTTTACCT TCTTATAATA
  TAGAATTAGT AGCTACTTTT                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325561458	CHEV_18_26000657	CHEVERUD	SCREENING_POP	f	SNP	G	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244002602					SNP	G	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:25975213 () rs orientation: forward

Symbol	Name	Function Class
Gm33228	predicted gene, 33228	within coordinates
Gm56495	predicted gene, 56495	within coordinates
Rr344994	regulatory region 344994	1013 bp distal
Rr350889	regulatory region 350889	1074 bp distal