rs244004259 SNP Detail

Summary

• ID
  rs244004259
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr17:26755688 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CACTA TGTAGAGTAG GAAGGCCAAG
  M
  TCCTTCCCTC AATGCCATCT GCATC                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325342280	CHEV_17_26673659	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244004259					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr17:26755688 () rs orientation: forward

Symbol	Name	Function Class
Gm34606	predicted gene, 34606	350 bp downstream
Gm50275	predicted gene, 50275	within coordinates
Gm64855	predicted gene, 64855	955 bp downstream
Rr405114	regulatory region 405114	1336 bp upstream
Tssr5048	transcription start site region 5048	1357 bp downstream
Tssr5049	transcription start site region 5049	1306 bp upstream
Tssr5050	transcription start site region 5050	878 bp downstream
Tssr143246	transcription start site region 143246	1616 bp upstream