rs244019602 SNP Detail

Summary

• ID
  rs244019602
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:72614320 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atgaagtag caatgacagt aattttatgg
  ttgggggtca ccacaacatg agtaactcta ttaaagggtc acagcattag gaaggttgaa
  acccacAGGA GACCAAGGAG AAAGAAGGGA TGGGCCTCTA AATGTTCCTT TGGGGGAAAA
  W
  GCCTTTCAGT AGAACCAAGG TTCTCCTTGC TTAGAACCAG AGTTTCAGGG GTTGCTGGGT
  CACACACAAC TTCTGCTTGG TGATTTTCAA TATCTCAGTT GTTCCTTTGC TAAATTTAGA
  TCAGCTGGTG AGAGACTGAG AAGCCATGGC                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320343714	CHEV_2_72622033	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244019602					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:72614320 () rs orientation: forward

Symbol	Name	Function Class
6430710C18Rik	RIKEN cDNA 6430710C18 gene	within coordinates
Gm39848	predicted gene, 39848	within coordinates
Rr559033	regulatory region 559033	1818 bp distal
Rr559034	regulatory region 559034	1293 bp distal
Rr559035	regulatory region 559035	1427 bp proximal