rs244033964 SNP Detail

Summary

• ID
  rs244033964
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:31051190 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ACTCAGGACC TTCAGAAGAG
  CAGTCGGCAC TCTTAACCAC TGAGCCATCT CGCCAGCCCC CCAGGGCATT CTTTTCTGCC
  TCCAGGGGAA TACATGTATG CAAATAGATA GACAGACACA GTAAATAATA GAAATAAACC
  TTAAAAAGTC TGTTAAAAGC CGGGCGTGGT GGCGCACACC TTTATTCCCA GTACTGGGGG
  S
  GGGGGTGGGG GGGGGTGGGG GGTGGTGGCA GAGGCAGGTG GATTTCTGAG TTCTAGGCCA
  GCCTGGTTTA CAAAGTGAGT TCCAGGACAG CCAGGGCTAT ACAGAGAAAC CCTGTCTCGA
  ACCCCCCTCC CCCCCCCAAA AAAGAAATGG CTGTATGCTC CTGGTGTGTG TGTGGGTGTG
  TGTGAAAAAG AAATGGCTGT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C58/J	CAST/EiJ	CE/J	DBA/2J	I/LnJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J	SM/J	ST/bJ	ZALENDE/EiJ
ss353531888	MGP_WTSI_2_31016698	EVA_MGPV3	EVA_MGPV3	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C58/J	CAST/EiJ	CE/J	DBA/2J	I/LnJ	KK/HlJ	MA/MyJ	NOD/ShiLtJ	NON/ShiLtJ	NZB/BlNJ	PL/J	QSi3/Ianm	QSi5/Ianm	SJL/J	SM/J	ST/bJ	ZALENDE/EiJ
rs244033964					SNP	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss353531888	MGP_WTSI_2_31016698	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:31051190 () rs orientation: forward

Symbol	Name	Function Class
Gpr107	G protein-coupled receptor 107	within coordinates
Rr372995	regulatory region 372995	383 bp upstream
Rr554554	regulatory region 554554	230 bp distal