rs244044739 SNP Detail

Summary

• ID
  rs244044739
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:70183587 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    cacatcctt attgtgtact ggcgctgttc
  tccgggctaa gcatacagtg gagaacagcc aagcagcccc agtctcACGC GTCTATGAGA
  AGCAAGGGAC AGGAAACCTG GCCAAATAGA CACAATTAGC TTTATGTATT TATGACTTTA
  Y
  GACCACAGGT TCAATCAAGG GTCTTGTTTG AAACAGATAG GTCTTTAAGG GTTTTATATG
  TGCTGAATTG GAAATACAGA CATGTACAAa tatatatata tatatgcata tttttgtata
  tgtacatgta tacacacatg tataggtata                                 
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324086846	CHEV_12_71237800	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244044739					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:70183587 () rs orientation: forward

Symbol	Name	Function Class
Cpgi4707	CpG island 4707	1944 bp distal
Gm56526	predicted gene, 56526	514 bp upstream
Rr403332	regulatory region 403332	149 bp downstream
Rr467201	regulatory region 467201	525 bp distal
Rr467202	regulatory region 467202	24 bp distal
Tssr116556	transcription start site region 116556	537 bp upstream