rs244077906 SNP Detail

Summary

• ID
  rs244077906
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:118374680 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGCCCAGCCC TGACAGTTAC TTGTTCCTGT GATCTAAACA
  CAGACACACA CACAGACACA CACAGACACA CACAGACACA CACACACACA CACACACACA
  Y
  ACACACGCTG CAAGGATAAG AACACAGTCC CACAGGTAGA GATTGTGTTC ATTCCCCTGT
  CTTGTGGCTT TGCTAGGTAG CATCTGTACC AGCAAGGAT                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320470269	CHEV_2_118369935	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244077906					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:118374680 () rs orientation: forward

Symbol	Name	Function Class
Bmf	BCL2 modifying factor	within coordinates
Cpgi12082	CpG island 12082	185 bp proximal
Rr397207	regulatory region 397207	1563 bp upstream
Rr563262	regulatory region 563262	855 bp distal
Rr563263	regulatory region 563263	1985 bp proximal
Tssr25777	transcription start site region 25777	963 bp downstream
Tssr25778	transcription start site region 25778	1111 bp downstream