rs244087450 SNP Detail

Summary

• ID
  rs244087450
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr9:119802839 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CATTTGCCAC GGCCACTGCC
  AAGTCCTCCT CTACAGAGGC GTCATCGATG GCATCCGCTG TGAGAGGCAC GCCTGCCCCT
  GACTCCGGAA CTCCAGCCAC TGAAAACTAT AAGTACAGAA AGACGGTGTG AGAGAGAGAG
  AGATTTAGCT CTCCCAGAGA GTGGGGTGCT GTCTGTGGGG GAGGGGTACA CACTGTGCTC
  M
  ACAGCTACAA GGATCTCTTA CTCAAACCCC GATGTACTGG CAGTGTCAGA TCAGTCTAGC
  CGGCTGATCG GATTCAGCTA GGAAGATTCA AGCATTATTT ATGCCCAGGG CCTAGCCTGT
  GGTCTGAAGC CGACTACTTT CATTTGGGAA AGGGCCATGG CCTCAAGCTT GCGGAGGATG
  ACCTCGAATC CCTGATTCCT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323223782	CHEV_9_119882891	CHEVERUD	SCREENING_POP	f	SNP	A	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244087450					SNP	A	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:119802839 () rs orientation: forward

Symbol	Name	Function Class
Cpgi22487	CpG island 22487	346 bp proximal
Csrnp1	cysteine-serine-rich nuclear protein 1	Intron
Rr688590	regulatory region 688590	285 bp proximal
Rr688591	regulatory region 688591	984 bp proximal
Rr688592	regulatory region 688592	1028 bp proximal