rs244140647 SNP Detail

Summary

• ID
  rs244140647
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr9:40276080 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAAGCCAAC TCTCTGGCTG
  CACACTCCGC TCTCAGCACT TAACAAAGCT TATGCTTAAC CCATCCTAAG TGTACACTCA
  TCCAAAGGGA TATTACTAGT ACTGCTACAG ACGTCCTGGG TTAGACAATG GCTCCTCACT
  GGCTAGGCGG GGCTGTGCTT GGCTCCCACT ACTGATGAGC TTCGCCAGAA TATTATTTTG
  Y
  TTATTTATAT CAAAGAAGGC AAGAAAATGA AATAGAAACC TTCCAGAAGT GATTTGGAAG
  TCTAAAGGAA ATCTTTTGGA CATGCCAGGG TTGATATATG TAAAATAAAT GCAGAAAGGG
  GGCAGGGAGT GGGGGACATG TGCTCTGCAA AGCAAATTAC CTTCAAAAGT CAATGGTCGT
  GTCCCAAATT TGCATATATC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322915579	CHEV_9_40172369	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244140647					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr9:40276080 () rs orientation: forward

Symbol	Name	Function Class
Gm48114	predicted gene, 48114	within coordinates
Gm68184	predicted gene, 68184	within coordinates
Gramd1b	GRAM domain containing 1B	within coordinates
Rr194718	regulatory region 194718	721 bp proximal
Rr200102	regulatory region 200102	80 bp distal
Rr200103	regulatory region 200103	121 bp proximal