rs244200125 SNP Detail

Summary

• ID
  rs244200125
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:56499636 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CCTCTGCCC TCCTGCTACT GGTGACAGCG
  GGGTTAGACC ACTAAAGGAA GGTGTTGCTT ACTCACCTGC CTTTGTCCTG GAGGCCAGAG
  ACAAGGTCAG CAGTAGCAGG AGGATCTTCA TCTTCCCCGG AAGGCCGCCT AGGTCCCAGC
  R
  TCAAGAGTGT TGTCCTTGCT CTCTTTTAAC CTCTAGGAGA GGAAGAAGGC AGAGGGGGCT
  CTGTGACCTT GTACCCCCTC TCTGCTTTTA TGATGCTTCA TCACATGCTT TCTATGAAAA
  CTCCTGCCCT ACTGCCCCTG CCTGATGACG                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324645050	CHEV_14_56881016	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244200125					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:56499636 () rs orientation: forward

Symbol	Name	Function Class
Gzmb	granzyme B	within coordinates
Rr295614	regulatory region 295614	within coordinates
Tssr128924	transcription start site region 128924	within coordinates
Tssr128925	transcription start site region 128925	38 bp downstream
Tssr128926	transcription start site region 128926	54 bp downstream