rs244226437 SNP Detail

Summary

• ID
  rs244226437
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr2:147020302 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCACCCCACA CCGCTGCCTC
  TGTGTAGTTT AGGAATTGGC ACCGAGTTGG CATACTTTTA TAGGATGGGG TGTTTCAGCC
  TCCCATTAAC CGCCCCCAAG CGTCCACGCG GCGTGTCCCC CTGGTGGTAA AATCCCGCTA
  CTGTATAGCA TGCAGTGTCA AGGCAAAGGC TCTGACCAAG AAGCCTTTCT GGATTGTAAG
  M
  TGCACCACAA CCTAACTGGA TTTGAGGGTT GAATAGGATC ACTTGGAGGC CATATTACAT
  GCTGGCCAAA AGATGGTTTC TTCGTTCTAG TACCTCCCGC GAAAAGCGGG GAAGGTTGGA
  CCGAAGTCAG AATTTCTCTA AACTCTCCAT TACACTCATA CTGAGCCACC TTCCCCTGCC
  GTCATCTAAA ATGGTCCGAG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320548171	CHEV_2_147004118	CHEVERUD	SCREENING_POP	f	SNP	C	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244226437					SNP	C	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:147020302 () rs orientation: forward

Symbol	Name	Function Class
Cpgi12376	CpG island 12376	within coordinates
Cpgi12377	CpG island 12377	260 bp proximal
Nkx2-2	NK2 homeobox 2	within coordinates
Rr406682	regulatory region 406682	1908 bp proximal