rs244230738 SNP Detail

Summary

• ID
  rs244230738
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr2:70915870 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    CTGTCTGTT TGATTCTAGT TACCATGATT
  CAAAACTGGA AATATTCTAC CGTTCTCACC CCCAGCTTGT ATACTAGCCC AGTCAAGACC
  AAGACCTCTC CTGCCAGAAA TCTGAAATCT tttttttctt ccttcctctt cttcttcctc
  W
  tcctcttctt tcctttcctt tcccttcccc ttcctctctt tctttctttc tttctttctt
  tctttctttc tttctttctt tctttctttt tatttttttc tagtcaggat ctctatgtgg
  tcctagctgt cctagaattt gctttgtaga                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss320335273	CHEV_2_70923583	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244230738					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr2:70915870 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dcaf17	DDB1 and CUL4 associated factor 17			Intron
				Noncoding-Transcript-Variant
Rr558667	regulatory region 558667			1192 bp distal
Tssr18238	transcription start site region 18238			1346 bp downstream