rs244233957 SNP Detail

Summary

• ID
  rs244233957
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr19:56265176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACCTCTGG TTTCTGCTAC
  CCTATCAATA CTGGACCCTC ACTGGGACTC CTCTCAGATA TCCTATGTTG CCCTGTAGTT
  TTTCAATTGT AGGACCTGCT CCTTCATATT CCAGCAGTTC ATCAGTGGGG TAGATGTTGG
  AATGAGCCAA TTCAAAGCCC TGGATCTGGG CCTGAAAGGT TTCCTAGCTG TTTAGCCTGC
  W
  GAGTCTCTCG TGCCTTTGGA GTTAGCTCAC CAGCAAATCC TCCAGCCGGG GCCGGTTCTA
  TCCCACTGGC CAGGTGAGGT GCAGGGCCTG CCCTCCCGAG TGCTGCAGCA GGTGAGGGGC
  AGGGAGAGCT TTCTTGTTCT GATGACCCCA AGGCCAGGGC TTCCATCTGC CCTGGTGGTG
  AAGGATAGAG GGTAAGAGGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss325856829	CHEV_19_56351234	CHEVERUD	SCREENING_POP	f	SNP	T	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244233957					SNP	T	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr19:56265176 () rs orientation: forward

Symbol	Name	Function Class
Gm22271	predicted gene, 22271	774 bp downstream
Gm32257	predicted gene, 32257	within coordinates
Rr549993	regulatory region 549993	608 bp proximal
Rr549994	regulatory region 549994	838 bp proximal
Rr549995	regulatory region 549995	1258 bp proximal
Rr549996	regulatory region 549996	1284 bp proximal
Rr549997	regulatory region 549997	1348 bp proximal