rs244250981 SNP Detail

Summary

• ID
  rs244250981
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:105288998 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGCTTTCCTT GAGTTTGTGT
  GTTTCTTCTC TTCTGAGGAC ATTATCTCTA CAGATGCATG CATACCAAAG CCTCGGGTGT
  CTTCTCATAA CCCCCCTACC TCGCCTTCAG TAACCATTCA TGCATTCAGT CATTCAACAA
  CTATCTAGTG AGTGTCTATT ATGAGTGAGA TACTGAGGCA ATGGGATTAT AGCAGTGAGG
  R
  CCAGAGGGGA GGTCTATGCT CTCTGGGAAC TTAACCCTGC AGAGGCAATG TTTACCAGAA
  CCCTTTCCTA GGCTCAGACT CTCACTTGCC ACTCAGGCAT GCTCTACAAT CCTGGTCTTT
  CACATTCTTT GGTGTTCCTT CCCCTCTTCC TTCAGCCGGT CTGGGCTCTT CCTTTCTCCA
  TCTCATGCAC CTGACTCCCT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322370116	CHEV_7_112788305	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244250981					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:105288998 () rs orientation: forward

Symbol	Name	Function Class
Arfip2	ARF interacting protein 2	within coordinates
Cpgi19541	CpG island 19541	293 bp proximal
Gm45799	predicted gene 45799	761 bp upstream
Rr400513	regulatory region 400513	457 bp upstream
Rr652793	regulatory region 652793	within coordinates
Rr652794	regulatory region 652794	276 bp proximal
Rr652795	regulatory region 652795	515 bp proximal
Timm10b	translocase of inner mitochondrial membrane 10B	265 bp upstream
Tssr2358	transcription start site region 2358	625 bp upstream
Tssr68382	transcription start site region 68382	672 bp upstream
Tssr68383	transcription start site region 68383	731 bp upstream
Tssr68384	transcription start site region 68384	992 bp upstream
Tssr68385	transcription start site region 68385	1205 bp upstream
Tssr68386	transcription start site region 68386	1261 bp upstream
Tssr74083	transcription start site region 74083	526 bp downstream