rs244282189 SNP Detail

Summary

• ID
  rs244282189
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:130273340 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCATCTGC CTATTTTGAG
  TCTGTGAGGA GCTCAGAGAC TATCTTGCCC CAACCCCTCT CTCCATTGCT TTTACACACG
  CGCCCACACA TGCATCTTAT GTAGCCCAGG CTTCAGGTCT GAGTCAAGCT TTGTATGTAG
  TTGAGGATGT CCTTCCCTGC TCCTCTTAGT AGAGACAGCC ATGATGAAAT GCTGAGAAAA
  R
  AAATAGATGG CTGTAGCTGC AGTTCAGAGG GTAGAGTGCT TCCATGGCAT GCACAAAGCC
  CTGAACTTTA TCTCCAGCTT CAAATACAAC TGGGGGGGTG AGGCCTGCCA GCAATCCAAG
  CAGTTGAGAT AGACACAAGA TCAGATCATC ATCGTGTTGC TGTCACTCTG GATTACACCT
  TCACAACAAT ACATCATGAA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321317890	CHEV_4_130056794	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244282189					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:130273340 () rs orientation: forward

Symbol	Name	Function Class
2900017G11Rik	RIKEN cDNA 2900017G11 gene	363 bp upstream
Rr600532	regulatory region 600532	1855 bp distal
Rr600533	regulatory region 600533	1053 bp proximal
Snrnp40	small nuclear ribonucleoprotein 40 (U5)	within coordinates