rs244288365 SNP Detail

Summary

• ID
  rs244288365
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:106111176 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    GTTTAAGAA ACAATGTAGT GCCAGGTGTT
  TAAAGACCAG AGAAGGGGTT TAACATAAAT CTATACAAAT CATATTTGTG TTGATGCTCT
  AGAATTGTTA TTCCAGTGAG CTGTACAGGT AAGAAGGACC TTGATAGGTC AATGTCAATA
  R
  CAGATTTTGT GTGGGAGAAC CCAAGTAGAG GTAAGAACTC CATCAGACTG CTTGATTTTC
  TTTGGAACCC TGGGCAATAT GGGTGGTTAA AGTTATTTAC TGCCACAATG CAACACCTAA
  TTCTAGTCTG ACTAACTGGA GAGCAGTTAA                                 
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323838740	CHEV_11_106081664	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244288365					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:106111176 () rs orientation: forward

Symbol	Name	Function Class
Ddx42	DEAD box helicase 42	within coordinates
Rr242830	regulatory region 242830	1528 bp proximal
Rr245973	regulatory region 245973	1375 bp distal