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rs244359709 SNP Detail
Summary
  • ID
    rs244359709
  • Variation Type
    SNP
  • Alleles
    A/C
Genome Location and Flanking Sequence
  • Location
    Chr7:37920668 (GRCm39)
  • SNP Orientation to the Genome
    forward
  • SNP Reference Flanking Sequence
                                      GTTGCAGCT ATAGCCTGGT CACCAAGGAC
    TGCATGTGAA ATGGAAAGGA AATTATCTGA AAAAGACTTA GAAGAGGGCC CAGGAGGCTA
    CAGTCTAGTA GAAAGGCACT AGTAATGGCT CTGGAACAGC CACCTGTCAC ACGCCCACTG
    M
    CATGGGCAAG GGTCTCCGGC AGAGGACTGA CTTGATACAA ACACTCTGCA GGTAAAGGTC
    AACTATGGAA GGCTGACCAG GAGACACCAG AAGCATAGAA CTCCACCTGG GTGGGCCAGT
    CACCATCTCC ATTGCCCTCT CTGTCCTCAT                                 
    
    M = A/C
    

    Note: Sequence in lower case indicates low-complexity or repetitive sequence
    BLAST SNP flanking sequence against the mouse Genome
SNP Assays
and
SNP Consensus
Strain alleles of submitted assays, and consensus values for this SNP
Legend
Assay ID Submitter
SNP ID
Submitter
Handle
Population
ss orientation
Variation Type
LG/J
SM/J
ss322180564 CHEV_7_39006263 CHEVERUD SCREENING_POP f SNP C A
SNP Consensus Information
SNP Consensus Type
LG/J
SM/J
rs244359709 SNP C A
Gene/Marker
Associations
and
Function
Classes
MGI genes/markers associated with the SNP
Location: Chr7:37920668 () rs orientation: forward
Symbol Name Transcript Protein Function
Class
Allele Residue Codon
Position
AA
Position
Cpgi18905 CpG island 18905 212 bp proximal
Plekhf1 pleckstrin homology domain containing, family F (with FYVE domain) member 1 within coordinates

Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
12/17/2024
MGI 6.24
The Jackson Laboratory