rs244389418 SNP Detail

Summary

• ID
  rs244389418
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:35932192 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACAATAAT GACACAGGTT
  GGAGTTTTAG AGGGTGAAGA GAAAAATGGA AGATAAGAAA TGGGAAAAAA AGCAGTTGGG
  GAATAAACTC AGATAGTTTT AGATATGTAG ATTTCTCCTG CTAACTAAGC CTTTGGTGAG
  ATGTCCCTGT GTCTGAGAGG TTTATTTTTA TTTTATCGTC CCCCCCCCCC AAGGCTGTTT
  Y
  CTGGTAGAGC GGGTTTGCTG TTGACATCTG AGTGAGACAG AGAGCTGAGG AGTGTTTTGG
  ATGTTTAGAA GTCCTCTCAG GTAAGGGATT GCTGGCTCTG GGGCTGCGGA TAAGCTTGGA
  GCGGAGGCTG GCTGGGGCCT TACCTTGTAC CACTGTATAG GAGGCCTCCA CGGAGGAGAG
  GTTGGTGATC ACAGTGACGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323639167	CHEV_11_35854867	CHEVERUD	SCREENING_POP	f	SNP	T	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244389418					SNP	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:35932192 () rs orientation: forward

Symbol	Name	Function Class
D11Mit108	DNA segment, Chr 11, Massachusetts Institute of Technology 108	415 bp proximal
Rr240121	regulatory region 240121	592 bp distal
Rr243857	regulatory region 243857	177 bp distal
Tenm2	teneurin transmembrane protein 2	within coordinates