rs244393403 SNP Detail

Summary

• ID
  rs244393403
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:20774457 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GACAGGTAGA GAAAAGCCAC TTCCAATCTT TTATACTCCC
  GTACCCCAAG CTTCTGCTGA GTTACACATG CTTGCCCACT CAGAAGATCC CTCGGGGGGG
  K
  GGGGGGGGGT GCTTACTGCA TGAATCGAAT CCAAATCTCA TAAATGTTTT TCAGGGTGTG
  TTCTAAGTCT CTTGACAGAC ACTCCTCTAA AGTGGCTTT                       
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	CAST/EiJ	CBA/J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	MA/MyJ	MOLF/EiJ	NZO/HlLtJ	PL/J	RF/J	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	SWR/J	ZALENDE/EiJ
ss382653212	MGP_WTSI_11_20724460	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	T	T	G	T	T	T	G	G	T	T	T	T	G	T	T	G	G	T	T	G	T	T	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	C57BL/6J	C57BL/10J	CAST/EiJ	CBA/J	DBA/2J	FVB/NJ	I/LnJ	JF1/MsJ	KK/HlJ	MA/MyJ	MOLF/EiJ	NZO/HlLtJ	PL/J	RF/J	RIIIS/J	SEA/GnJ	SM/J	SPRET/EiJ	ST/bJ	SWR/J	ZALENDE/EiJ
rs244393403					SNP	G	G	T	T	G	T	T	T	G	G	T	T	T	T	G	T	T	G	G	T	T	G	T	T	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss382653212	MGP_WTSI_11_20724460	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:20774457 () rs orientation: forward

Symbol	Name	Function Class
Lgalsl	galectin like	within coordinates