rs244405612 SNP Detail

Summary

• ID
  rs244405612
• Variation Type
  SNP
• Alleles
  C

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:113618768 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AACAAAGAGA AGGAGGGAAG
  GAAGGAGGGC GGAGGGAAGG GAGGGAGGCA GGGGTTGGTG GGTAAGAAAG CCTATTACAC
  AGATGTGTAA TTCCCGAATG TAGGAAGTAG AGGTAGGAAG ATCAGGATGG AATTCCACTC
  CGGCCTGGGC TACTTTTGAG GGTCTGTCTC AAAAAGCCAA AAACCAAGTA AGCAGCAAGC
  C
  ATCAAATGAT AAACAAACAA ACCCATTATC AACCATCACA TAATCCACAC ATTTAAGGAG
  CACCTCTGTG AGTGCTCACA CACACTCACG TGCACACCAT ACATCCCGCC GCCCCTGCCC
  CCTCCGCTCT AGGTGTTTTC TGTTGTAGCA TTTTATGTGA GTGGGACCAT CCTGCGTGCA
  CTGTCCTTTG CGAATGGCTT                                            
  
  C = C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss321911279	CHEV_6_113591801	CHEVERUD	SCREENING_POP	f	SNP	C	C
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244405612					SNP	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113618768 () rs orientation: forward

Symbol	Name	Function Class
Gm43964	predicted gene, 43964	247 bp upstream
Irak2	interleukin-1 receptor-associated kinase 2	within coordinates