rs244413762 SNP Detail

Summary

• ID
  rs244413762
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:69815447 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                    atggtccag aggttaagag caatgactgc
  tcttccaaag gtcctgagtt caaatcccag caaccacatg taatgagatt ggatgccctc
  ttctggtgtg tctgaagaca gctacagtat actcacatat aataaataaa taaatctttt
  W
  aaaaaaaaca aCGTCCTTTT GGTGATTACT TTTGTATCTT TTTCTCatct atttatctat
  ctacatatct atctatgtat ctatatatct atgtatctat gtatatattt atgtatatat
  ttatgtatca tctatgtatg tagtatgtat                                 
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324085529	CHEV_12_70869660	CHEVERUD	SCREENING_POP	f	SNP	A	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244413762					SNP	A	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:69815447 () rs orientation: forward

Symbol	Name	Function Class
Cdkl1	cyclin dependent kinase like 1	within coordinates
Rr467133	regulatory region 467133	882 bp distal
Tssr116524	transcription start site region 116524	1381 bp upstream
Tssr116525	transcription start site region 116525	630 bp downstream
Tssr116526	transcription start site region 116526	1060 bp downstream