rs244427372 SNP Detail

Summary

• ID
  rs244427372
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr11:57919440 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTGGCCTACC AACTACTTTG
  TCCTGCTGGA GGTTGGGACA GGTGGTCTAG GACAAACCAG TACCAAGCAG CTCATCAACC
  ACTGTCCAGG TCTTCAGAGT ACTTGGCTTG GGTTCTGCAT TTGTTCTGCC TGGTTTTTCA
  TCCAAGTCTT GGTAAGAGAA CCCAAACCTA GAGTTTTTGT TTGTTTGTTT TCCTTTTTCT
  Y
  CATCCCCCTC CTCCCTGAGA CAGGGTTTCT CTGTGTAGCC TTGGCTGTCC TGGAACTCAC
  TCTGTACACC AGGTTGGCCT TGAACTCAGA AATCAGCCTG CCTCTGCCTC TCAGGTGCTG
  GGATTAAAGG TGTGCGCCAC CACTGCCCGG CCCAAGCCTA GAGTTTTAAG TCTTGTTTTA
  GGGCAGAGTG ATCCTTGGAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss323687336	CHEV_11_57842116	CHEVERUD	SCREENING_POP	f	SNP	C	T
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244427372					SNP	C	T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:57919440 () rs orientation: forward

Symbol	Name	Function Class
Gm51897	predicted gene, 51897	within coordinates
Larp1	La ribonucleoprotein 1, translational regulator	within coordinates
Rr386121	regulatory region 386121	101 bp upstream