rs244468648 SNP Detail

Summary

• ID
  rs244468648
• Variation Type
  SNP
• Alleles
  G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147502722 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GATGAGGTGG AACCTCAACG
  TAGTTTTAAA TTGCATTTCC TTGGTGGCCA ACTGTGTTGA TCATCTTTAA AAAATATCTT
  TTGACCATTT CTTTCACAAC TCTATACACA CTTTTAGCCT ATTTTTTAAA ACTTGGTTTA
  TTTCCTCTTT ATATAGTTCC CCCCCCCCGC ACGCCCCCCC CCCCCCTCCC AGCACCTGTA
  G
  AGCCTTTAGG ATGACCTGGC CACGTGAGCT ATCAGCCTAA TCTGAAGGAC AAACATACCA
  TGCTGGCAAA TAAAGACAGA AAATGGAGGA GACAGAGTTT CTTATTGGTG AGGTTTTTGA
  GAAAGGAGCC TCACAACTTT TGTGGCTAGT GCTGGCTGGA CAATGGATGT GACCAGTGAC
  CATCCCGTTC ACATTTAATT                                            
  
  G = G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CE/J	DBA/2J	FVB/NJ	KK/HlJ	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SJL/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
ss360152923	MGP_WTSI_3_147460050	EVA_MGPV3	EVA_MGPV3	f	SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129P2/OlaHsd	129S1/SvImJ	A/J	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	BTBR T<+> Itpr3/J	BUB/BnJ	C3H/HeJ	C57BL/6J	C57BL/6NJ	C57BL/10SnJ	CAST/EiJ	CE/J	DBA/2J	FVB/NJ	KK/HlJ	LP/J	MA/MyJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SJL/J	SWR/J	WSB/EiJ	ZALENDE/EiJ
rs244468648					SNP	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss360152923	MGP_WTSI_3_147460050	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147502722 () rs orientation: forward

Symbol	Name	Function Class
Rr587161	regulatory region 587161	246 bp distal