rs244476498 SNP Detail

Summary

• ID
  rs244476498
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:110342777 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GGAAAGACCA GCAGCTCCCC CACCAGGATG CTCACGCTTT
  GGTGAGAGAT GTTCTGTCTG CAGGGGCTAG AGGCTGCTGG AAGCCAGGTG CTGCTCAGGA
  R
  GTGGGGTTGG GGAGCTGCTT GCTGTGTGCA TGGTGGCTCA CTGCAGAACA GGACAGCTAT
  AAAGACAACA CGGTACAGTG GTGTGTGCCA TCCTTAGAC                       
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss324157760	CHEV_12_111614553	CHEVERUD	SCREENING_POP	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244476498					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:110342777 () rs orientation: forward

Symbol	Name	Function Class
Rr472874	regulatory region 472874	821 bp distal
Rr472875	regulatory region 472875	121 bp proximal
Rr472876	regulatory region 472876	404 bp proximal
Rr472877	regulatory region 472877	1451 bp proximal
Rr472878	regulatory region 472878	1515 bp proximal
Rr472879	regulatory region 472879	1595 bp proximal
Tssr115196	transcription start site region 115196	826 bp downstream