rs244501481 SNP Detail

Summary

• ID
  rs244501481
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:23772228 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCCCTGGTTC CTTGGGGGTC
  CCAGTTATGC TGAGTGTTGG GGAAAATGTT GTAGCCTCAG CTGTGGTCTT GAGTGTGTCA
  GAGCTCCAGT GCTCCCATGT GTGTCCAATC TTCTAGGAAT CAAGCTTCCT CTGTGATCCT
  GTGAGCCTGT GATCCTGTGA GCCTGTGATC CTGTGAGCCT GTGATCCTGT GAGCCTGTGA
  K
  CCTGTGAGCC TGTGAGCCTG TGAGCCTGTG ATCCTGTGAG CCTGTGATCC TGTGAGCCTG
  TGATCCTGTG AGCCTGTGAT CCTGTGAGCC TGTGTCAGAG CACCTGTGAT CCTGTGAGCC
  TGTGAGCCTG TGAGCCTGTG ATCCTGTGAG CCTGTGATCC TGTGATCCTG TGAGCCTGTG
  ATCCTGTGAG CCTGTGATCC                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ
ss370774553	MGP_WTSI_7_24857822	EVA_MGPV3	EVA_MGPV3	f	SNP	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	B10.RIII-H2 H2-T18/(71NS)SnJ	BALB/cByJ	BALB/cJ	C57BL/6J	C57BL/6NJ	C57BL/10J	C57BL/10SnJ	C57BR/cdJ	C57L/J	C58/J	CE/J	CZECHII/EiJ	DBA/1J	DBA/2J	FVB/NJ	I/LnJ	KK/HlJ	LG/J	NOD/ShiLtJ	NON/ShiLtJ	NZO/HlLtJ	PL/J	QSi3/Ianm	QSi5/Ianm	RF/J	RIIIS/J	SEA/GnJ	SJL/J	ST/bJ	SWR/J	WSB/EiJ
rs244501481					SNP	T	T	T	T	T	T	T	T	T	T	T	T	G	T	T	T	T	T	T	G	T	T	T	T	T	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss370774553	MGP_WTSI_7_24857822	SC_MOUSE_GENOMES	SC_MOUSE_GENOMES	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:23772228 () rs orientation: forward

Symbol	Name	Function Class
Gm36694	predicted gene, 36694	within coordinates
Gm44943	predicted gene 44943	1112 bp upstream