rs244523970 SNP Detail

Summary

• ID
  rs244523970
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  137
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr7:3417785 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTATC CCTCTGACTG CGGACTGCAC
  R
  GTGACACTTC TTGAGCTGGC TCTTC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	LG/J	SM/J
ss322091734	CHEV_7_3368863	CHEVERUD	SCREENING_POP	f	SNP	G	A
SNP Consensus Information
SNP					Consensus Type	LG/J	SM/J
rs244523970					SNP	G	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr7:3417785 () rs orientation: forward

Symbol	Name	Function Class
Cacng7	calcium channel, voltage-dependent, gamma subunit 7	1048 bp downstream
Gm9567	predicted gene 9567	1158 bp downstream
Gm44257	predicted gene, 44257	1153 bp downstream
Gm72265	predicted gene, 72265	1047 bp upstream
Rr641804	regulatory region 641804	598 bp distal
Rr641805	regulatory region 641805	1248 bp proximal
Tssr64259	transcription start site region 64259	1867 bp downstream
Tssr64260	transcription start site region 64260	1844 bp downstream